titanQC: QC Procedures for the GeneTitan platform
Version 0.0-7

QC Procedures for the GeneTitan platform

AuthorStijn Dickens, Hinrich Göhlmann, Willem Talloen, Suzy Van Sanden, Tobias Verbeke
Date of publicationNone
MaintainerTobias Verbeke <tobias.verbeke@openanalytics.eu>
LicenseGPL-3
Version0.0-7
Package repositoryView on R-Forge
InstallationInstall the latest version of this package by entering the following in R:
install.packages("titanQC", repos="http://R-Forge.R-project.org")

Popular man pages

boxPlate: Generate a boxplot of normalized probeset intensities for...
densityPlate: Generate for each well on the plate a density plot of the...
displayPlate: Draw a summary display for a GeneTitan plate...
getCelFilePosition: Get the position of a set of CEL files on a GeneTitan...
getPosition: Get the position on the plate for one single CEL File...
plot.ahullS: Patched version of the plot...
statisticPlate: Adds a statistic to the pData of the ExpressionSet object...
See all...

All man pages Function index File listing

Man pages

boxPlate: Generate a boxplot of normalized probeset intensities for...
densityPlate: Generate for each well on the plate a density plot of the...
displayPlate: Draw a summary display for a GeneTitan plate...
getCelFilePosition: Get the position of a set of CEL files on a GeneTitan...
getPosition: Get the position on the plate for one single CEL File...
MAPlate: Generate MA plots for all individual wells on a GeneTitan...
plmPlate: Plot affyPLM QC images on a grid respecting the plate...
plot.ahullS: Patched version of the plot...
statisticPlate: Adds a statistic to the pData of the ExpressionSet object...

Functions

MAPlate Man page Source code
boxPlate Man page Source code
densityPlate Man page Source code
displayPlate Man page Source code
geneFiltering Source code
getCelFilePosition Man page Source code
getPosition Man page Source code
plmPlate Man page Source code
plot.ahullS Man page Source code
statisticPlate Man page Source code

Files

R
R/getPosition.R
R/boxPlate.R
R/densityPlate.R
R/displayPlate.R
R/MAPlate.R
R/plmPlate.R
R/geneFiltering.R
R/statisticPlate.R
NAMESPACE
inst
inst/TODO
inst/doc
inst/doc/titanQC.Rnw
inst/doc/titanQC.pdf
inst/NEWS
DESCRIPTION
man
man/getCelFilePosition.Rd
man/statisticPlate.Rd
man/plmPlate.Rd
man/boxPlate.Rd
man/plot.ahullS.Rd
man/getPosition.Rd
man/displayPlate.Rd
man/densityPlate.Rd
man/MAPlate.Rd
titanQC documentation built on May 21, 2017, 3:29 a.m.

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