Description Usage Format Details Source References Examples
Tree counts in 1-hectare plots in the Barro Colorado Island and associated site information.
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A data frame with 50 plots (rows) of 1 hectare with counts of trees on each plot with total of 225 species (columns). Full Latin names are used for tree species. The names were updated against http://www.theplantlist.org in Jan 2014 (see ChangeLog 2.1-41 for details) which allows matching 206 of species against http://datadryad.org/resource/doi:10.5061/dryad.63q27 (Zanne et al., 2014).
For BCI.env
, a data frame with 50 plots (rows) and six site
variables:
UTM.EW
: UTM coordinates (zone 17N) East-West
UTM.NS
: UTM coordinates (zone 17N) North-South
Precipitation
: Precipitation in mm per year
Elevation
: Elevation in m above sea level
Age.cat
: Forest age category
Geology
: The Underlying geological formation
Data give the numbers of trees at least 10 cm in diameter at breast height (1.3 m above the ground) in each one hectare square of forest. Within each one hectare square, all individuals of all species were tallied and are recorded in this table.
The data frame contains only the Barro Colorado Island subset of the original data.
The quadrats are located in a regular grid. See BCI.env
for the
coordinates.
A full description of the site information in BCI.env
is given
in Pyke et al (2001)
http://www.sciencemag.org/cgi/content/full/295/5555/666/DC1
Condit, R, Pitman, N, Leigh, E.G., Chave, J., Terborgh, J., Foster, R.B., Nuñez, P., Aguilar, S., Valencia, R., Villa, G., Muller-Landau, H.C., Losos, E. & Hubbell, S.P. (2002). Beta-diversity in tropical forest trees. Science 295, 666–669.
Zanne A.E., Tank D.C., Cornwell, W.K., Eastman J.M., Smith, S.A., FitzJohn, R.G., McGlinn, D.J., O’Meara, B.C., Moles, A.T., Reich, P.B., Royer, D.L., Soltis, D.E., Stevens, P.F., Westoby, M., Wright, I.J., Aarssen, L., Bertin, R.I., Calaminus, A., Govaerts, R., Hemmings, F., Leishman, M.R., Oleksyn, J., Soltis, P.S., Swenson, N.G., Warman, L. & Beaulieu, J.M. (2014) Three keys to the radiation of angiosperms into freezing environments. Nature doi:10.1038/nature12872 (published online Dec 22, 2013).
Pyke, C. R., Condit, R., Aguilar, S., & Lao, S. (2001). Floristic composition across a climatic gradient in a neotropical lowland forest. Journal of Vegetation Science 12, 553–566. doi:10.2307/3237007
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Loading required package: permute
Loading required package: lattice
This is vegan 2.4-3
UTM.EW UTM.NS Precipitation Elevation Age.cat Geology Habitat Stream EnvHet
1 625754 1011569 2530 120 c3 Tb OldSlope Yes 0.6272
2 625754 1011669 2530 120 c3 Tb OldLow Yes 0.3936
3 625754 1011769 2530 120 c3 Tb OldLow No 0.0000
4 625754 1011869 2530 120 c3 Tb OldLow No 0.0000
5 625754 1011969 2530 120 c3 Tb OldSlope No 0.4608
6 625854 1011569 2530 120 c3 Tb OldLow No 0.0768
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