Man pages for AnnotationForge
Tools for building SQLite-based annotation data packages
| AnnDbPkg-maker | Create an SQLite-based annotation package |
| available.db0pkgs | available.db0pkgs |
| generateSeqnames_db | Generates the seqnames.db package and database |
| getProbeData_1lq | Read a 1lq file for an Affymetrix genechip |
| getProbeDataAffy | Read a data file describing the probe sequences on an... |
| makeChipPackageFromDataFrames | Making a chip package from annotations available from... |
| makeInpDb | Builds an individual DB from online files at inparanoid that... |
| makeOrgPackage | Making an organism package from annotations available from a... |
| makeOrgPackageFromNCBI | Make an organism package from annotations available from... |
| makeProbePackage | Make a package with probe sequence related data for... |
| sqlForge-makeCHIPDB | Creates a sqlite database, and then makes an annotation... |
| sqlForge-popDB | Populates an SQLite DB with and produces a schema definition |
| sqlForge-wrapDBPackages | Wrap up all the Base Databases into Packages for distribution |
