Description Usage Arguments Details Value See Also Examples
View source: R/makeProbePackage.R
Read a 1lq file for an Affymetrix genechip
1 | getProbeData_1lq(arraytype, datafile, pkgname = NULL)
|
arraytype |
Character. Array type (e.g. 'Scerevisiaetiling) |
datafile |
Character. The filename of the input data file.
If omitted a default name is constructed from |
pkgname |
Character. Package name. If NULL the name is derived
from |
This function serves as an interface between
the (1) representation of array probe information data in the packages
that are generated by makeProbePackage
and (2) the
vendor- and possibly version-specific way the data are represented
in datafile
.
A list with three components
dataEnv |
an environment which contains the data frame with the probe sequences and the other probe data. |
symVal |
a named list of symbol value substitutions which can
be used to customize the man pages. See
|
pkgname |
a character with the package name; will be the same
as the function parameter |
makeProbePackage
1 2 3 4 5 6 | ## makeProbePackage(
## arraytype = "Scerevisiaetiling",
## maintainer= "Wolfgang Huber <huber@ebi.ac.uk>",
## version = "1.1.0",
## datafile = "S.cerevisiae_tiling.1lq",
## importfun = "getProbeData_1lq")
|
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.