Files in Autotuner

Automated parameter selection for untargeted metabolomics data processing

README.md R/peakwidth_est.R R/isolatePeaks.R R/EICParams.R R/peak_time_difference.R R/checkBounds.R R/checkEICFunctions.R R/Autotuner-class.R R/returnParams.R R/findTruePeaks.R R/peakwidth_table.R R/plot_signals.R R/internal.R R/dissectScans.R R/ThresholdingAlgo.R R/TIC_params.R R/data.R R/checkEICPeaks.R R/plot_peaks.R R/findPeakWidth.R R/extract_peaks.R vignettes/Autotuner.Rmd man/setAutoPeak_difference.Rd man/setAutoFile_col.Rd man/peak_time_difference.Rd man/eicParamsEsts.Rd man/createAutotuner.Rd man/observedPeak.Rd man/ThresholdingAlgo.Rd man/getAutoFile_col.Rd man/plot_signals.Rd man/checkBounds.Rd man/checkEICPeaks.Rd man/getAutoMetadata.Rd man/getAutoFactorCol.Rd man/returnParams.Rd man/filterPeaksfromNoise.Rd man/peakwidth_est.Rd man/setAutoFactorCol.Rd man/setAutoPeaks.Rd man/plot_peaks.Rd man/mzDb.Rd man/filterPpmError.Rd man/dissectScans.Rd man/getAutoPeak_table.Rd man/setAutoPeak_table.Rd man/setAutoIntensity.Rd man/setAutoTime.Rd man/setAutoFile_paths.Rd man/Autotuner-class.Rd man/getAutoPeak_difference.Rd man/setAutoMetadata.Rd man/peakwidth_table.Rd man/getAutoTime.Rd man/TIC_params.Rd man/findPeakWidth.Rd man/estimatePPM.Rd man/getAutoIntensity.Rd man/extract_peaks.Rd man/findTruePeaks.Rd man/estimateSNThresh.Rd man/initialize-Autotuner-method.Rd man/isolatePeaks.Rd man/getAutoFile_paths.Rd man/EICparams.Rd man/getAutoPeaks.Rd tests/testthat.R tests/testthat/test_gettersSetters.R tests/testthat/test_Autotuner.R tests/testthat/test_loadingData.R tests/testthat/test_paramSummary.R inst/doc/Autotuner.R inst/doc/Autotuner.Rmd inst/script/makeTestData.R inst/script/makeAutotunerTestData.R