Man pages for BEclear
Correct for batch effects in DNA methylation data

BEclearMatrix prediction method using a Latent Factor Model
BEclearDataExample data set for the BEclear-package
BEclear-packageCorrect for batch effects in DNA methylation data
calcMediansCalculate median difference values
calcPvaluesCalculate p-values
calcScorecalculate batch effect score
calcSummarySummarize median comparison and p-value calculation results
clearBEgenesPrepare a data matrix for the BEclear function
correctBatchEffectCorrect a batch effect in DNA methylation data
countValuesToPredictCount NA entries in a matrix
ex.corrected.dataExample matrix of corrected data for the BEclear-package
findWrongValuesFind DNA methylation values out of the boundaries
makeBoxplotproduce simple predefined boxplot for methylation data
replaceWrongValuesReplace DNA methylation values out of the boundaries
BEclear documentation built on Sept. 27, 2018, 6 p.m.