BaalChIP.report: Method BaalChIP.report

Description Usage Arguments Details Value Author(s) See Also Examples

Description

Method BaalChIP.report

Generates a data.frame per group with all variants and a label for all identified allele-specific binding (ASB) variants.

Usage

1
2
3
4
BaalChIP.report(.Object)

## S4 method for signature 'BaalChIP'
BaalChIP.report(.Object)

Arguments

.Object

An object of the BaalChIP class.

Details

The reported data frame contains the following columns:

Value

A named list, with a data.frame per group.

Author(s)

Ines de Santiago

See Also

summaryASB, getASB

Examples

1
2
3
4
5
6
7
8
data('BaalObject')
report <- BaalChIP.report(BaalObject)

#the reported list is grouped by group_name:
names(report)

#check out the report for one of the groups:
head(report[['MCF7']])

BaalChIP documentation built on Nov. 8, 2020, 5:23 p.m.