Method adjustmentBaalPlot

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Description

Method adjustmentBaalPlot

Produces a density plot of the distribution of allelic ratios (REF/TOTAL) before and after BaalChIP adjustment for RM and RAF biases.

Usage

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adjustmentBaalPlot(.Object, col = c("green3", "gray50"))

## S4 method for signature 'BaalChIP'
adjustmentBaalPlot(.Object, col = c("green3", "gray50"))

Arguments

.Object

An object of the BaalChIP class.

col

A character vector indicating the colours for the density plot ( default is c( 'green3','gray50') ).

Value

A plot

Author(s)

Ines de Santiago

See Also

BaalChIP.report, summaryQC

Examples

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