Files in Biobase
Biobase: Base functions for Bioconductor

NEWS
DESCRIPTION
NAMESPACE
inst/CITATION
inst/testClass.R inst/scripts/getBioCPkgNames.R inst/scripts/query.packages.R inst/scripts/makeExpressionSetPackage.R
inst/scripts/getBioCHelp
inst/scripts/esetTesting.R inst/scripts/getBioC.R inst/unitTests/test_checkClass.R inst/unitTests/test_AssayData.R inst/unitTests/test_AnnotatedDataFrame.R inst/unitTests/test_DataClasses.R inst/unitTests/test_combine.R inst/unitTests/test_cache.R inst/unitTests/test_ExpressionSet.R inst/unitTests/test_copyEnv.R inst/unitTests/utilities.R inst/unitTests/test_SnpSet.R inst/unitTests/test_UpdateObject.R inst/unitTests/test_EsetSubclasses.R inst/unitTests/test_subListExtract.R inst/unitTests/test_NChannelSet.R inst/unitTests/test_unsaveSetSlot.R inst/unitTests/test_VersionedClass.R inst/unitTests/test_esApply.R
inst/unitTests/VersionedClass_data/devel/NChannelSet.Rda
inst/unitTests/VersionedClass_data/devel/ScalarNumeric.Rda
inst/unitTests/VersionedClass_data/devel/aggregator.Rda
inst/unitTests/VersionedClass_data/devel/exprSet.Rda
inst/unitTests/VersionedClass_data/devel/ScalarCharacter.Rda
inst/unitTests/VersionedClass_data/devel/sample.exprSet.1.rda
inst/unitTests/VersionedClass_data/devel/Versioned.Rda
inst/unitTests/VersionedClass_data/devel/sample.exprSet.rda
inst/unitTests/VersionedClass_data/devel/AnnotatedDataFrame.Rda
inst/unitTests/VersionedClass_data/devel/ExpressionSet.Rda
inst/unitTests/VersionedClass_data/devel/ScalarInteger.Rda
inst/unitTests/VersionedClass_data/devel/swrep.rda
inst/unitTests/VersionedClass_data/devel/sample.eSet.rda
inst/unitTests/VersionedClass_data/devel/MIAME.Rda
inst/unitTests/VersionedClass_data/devel/golubMergeSub.rda
inst/unitTests/VersionedClass_data/devel/MultiSet.Rda
inst/unitTests/VersionedClass_data/devel/container.Rda
inst/unitTests/VersionedClass_data/devel/SnpSet.Rda
inst/unitTests/VersionedClass_data/devel/bbsym.rda
inst/unitTests/VersionedClass_data/devel/Versions.Rda
inst/unitTests/VersionedClass_data/devel/ScalarLogical.Rda
inst/unitTests/VersionedClass_data/devel/eset.rda
inst/unitTests/VersionedClass_data/devel/SWPD.rda
inst/unitTests/VersionedClass_data/devel/VersionedBiobase.Rda
inst/unitTests/VersionedClass_data/devel/VersionsNull.Rda
inst/unitTests/VersionedClass_data/1.8/exprSet.Rda
inst/unitTests/VersionedClass_data/1.8/AnnotatedDataFrame.Rda
inst/unitTests/VersionedClass_data/1.8/ExpressionSet.Rda
inst/unitTests/VersionedClass_data/1.8/MIAME.Rda
inst/unitTests/VersionedClass_data/1.8/phenoData.Rda
inst/unitTests/VersionedClass_data/raw/exprs.tab
inst/unitTests/VersionedClass_data/raw/varMetadata.tab
inst/unitTests/VersionedClass_data/raw/pData.tab
inst/unitTests/VersionedClass_data/2.0/aggregator.Rda
inst/unitTests/VersionedClass_data/2.0/exprSet.Rda
inst/unitTests/VersionedClass_data/2.0/ScalarCharacter.Rda
inst/unitTests/VersionedClass_data/2.0/Versioned.Rda
inst/unitTests/VersionedClass_data/2.0/AnnotatedDataFrame.Rda
inst/unitTests/VersionedClass_data/2.0/ExpressionSet.Rda
inst/unitTests/VersionedClass_data/2.0/MIAME.Rda
inst/unitTests/VersionedClass_data/2.0/MultiSet.Rda
inst/unitTests/VersionedClass_data/2.0/container.Rda
inst/unitTests/VersionedClass_data/2.0/SnpSet.Rda
inst/unitTests/VersionedClass_data/2.0/Versions.Rda
inst/unitTests/VersionedClass_data/2.0/phenoData.Rda
inst/unitTests/VersionedClass_data/2.0/VersionedBiobase.Rda
inst/unitTests/VersionedClass_data/2.0/VersionsNull.Rda
inst/doc/esApply.pdf
inst/doc/ExpressionSetIntroduction.Rnw
inst/doc/BiobaseDevelopment.Rnw
inst/doc/ExpressionSetIntroduction.pdf inst/doc/esApply.R inst/doc/BiobaseDevelopment.pdf inst/doc/ExpressionSetIntroduction.R inst/doc/BiobaseDevelopment.R
inst/doc/esApply.Rnw
inst/Code/DESCRIPTION
inst/Code/R/[email protected]@.R
inst/Code/man/@[email protected]
inst/Code/man/[email protected]@.Rd
inst/ExpressionSet/DESCRIPTION
inst/ExpressionSet/man/@[email protected]
inst/extdata/exprsData.txt
inst/extdata/pData.txt
vignettes/ExpressionSetIntroduction.Rnw
vignettes/BiobaseDevelopment.Rnw
vignettes/esApply.Rnw
vignettes/legacy/HowTo.Rnw
vignettes/legacy/Qviews.Rnw
vignettes/legacy/Biobase.Rnw
vignettes/legacy/Bioconductor.Rnw
R/methods-ScalarObject.R R/tools.R R/methods-NChannelSet.R R/zzz.R R/methods-ExpressionSet.R R/methods-aggregator.R R/updateObjectTo.R R/vignettes.R R/methods-MIAxE.R R/packages.R R/VersionsClass.R R/strings.R R/methods-container.R R/DataClasses.R R/methods-MultiSet.R R/VersionedClasses.R R/AllGenerics.R R/anyMissing.R R/methods-eSet.R R/methods-AssayData.R R/environment.R R/methods-SnpSet.R R/methods-VersionsNull.R R/rowOp-methods.R R/methods-AnnotatedDataFrame.R R/methods-VersionedClass.R R/methods-MIAME.R
src/rowMedians_TYPE-template.h
src/rowMedians.c
src/templates-types_undef.h
src/matchpt.c
src/sublist_extract.c
src/Rinit.c
src/templates-types.h
src/anyMissing.c
src/envir.c
man/selectChannels.Rd man/Aggregate.Rd man/class.Versions.Rd man/description.Rd man/rowMedians.Rd man/note.Rd man/class.characterORmiame.Rd man/storageMode.Rd man/strbreak.Rd man/makeDataPackage.Rd man/class.AnnotatedDataFrame.Rd man/class.VersionedBiobase.Rd man/class.eSet.Rd man/contents.Rd man/updateObjectTo.Rd man/createPackage.Rd man/phenoData.Rd man/data.geneData.Rd man/assayData.Rd man/class.MIAME.Rd man/copySubstitute.Rd man/class.container.Rd man/anyMissing.Rd man/addVig2Menu.Rd man/lcSuffix.Rd man/read.AnnotatedDataFrame.Rd man/class.MultiSet.Rd man/matchpt.Rd man/channel.Rd man/isUnique.Rd man/isCurrent.Rd man/class.ExpressionSet.Rd man/class.Versioned.Rd man/package.version.Rd man/exprs.Rd man/annotatedDataFrameFrom-methods.Rd man/data.aaMap.Rd man/notes.Rd man/subListExtract.Rd man/data.sample.MultiSet.Rd man/openPDF.Rd man/selectSome.Rd man/dumpPackTxt.Rd man/data.reporter.Rd man/class.NChannelSet.Rd man/data.sample.ExpressionSet.Rd man/isVersioned.Rd man/internals.Rd man/multiassign.Rd man/copyEnv.Rd man/Biobase-package.Rd man/class.aggregator.Rd man/esApply.Rd man/getPkgVigs.Rd man/snpCall.Rd man/readExpressionSet.Rd man/protocolData.Rd man/cache.Rd man/reverseSplit.Rd man/class.MIAxE.Rd man/class.AssayData.Rd man/read.MIAME.Rd man/openVignette.Rd man/channelNames.Rd man/ScalarObject-class.Rd man/listLen.Rd man/featureNames.Rd man/classVersion.Rd man/testBioCConnection.Rd man/userQuery.Rd man/class.SnpSet.Rd man/rowQ.Rd man/validMsg.Rd man/featureData.Rd man/abstract.Rd man/class.VersionsNull.Rd man/updateOldESet.Rd man/defunct.Rd
build/vignette.rds
tests/test-rowMedians.R tests/test-all.R data/sample.exprSet.R data/sample.eSet.R
data/seD.rda
data/SW.rda
data/sample.MultiSet.rda
data/reporter.rda
data/sample.exprSet.1.R data/geneData.R
data/geneCovariate.rda
data/aaMap.R
data/sample.ExpressionSet.rda
data/geneCov.R
Biobase documentation built on Nov. 1, 2018, 2:13 a.m.