balanceBC: Balance statistic: Bhattacharyya coefficient (BC)
In CAGEfightR: Analysis of Cap Analysis of Gene Expression (CAGE) data using Bioconductor
Description
Usage
Arguments
Value
Examples
Description
Calculates the Bhattacharyya coefficient from observed plus/minus
upstream/downstream signals to a perfect bidirectional site, where
plus-downstream = 50
Usage
1
balanceBC(PD, MD, PU, MU)
Arguments
PD
Plus-Downstream signal
MD
Minus-Downstream signal
PU
Plus-Upstream signal
MU
Plus-Upstream signal
Value
Balance score of the same class as inputs.
Examples
1
2
3
4
5
CAGEfightR documentation built on Nov. 8, 2020, 5:42 p.m.
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Description Usage Arguments Value Examples
Description
Calculates the Bhattacharyya coefficient from observed plus/minus upstream/downstream signals to a perfect bidirectional site, where plus-downstream = 50
Usage
1 | balanceBC(PD, MD, PU, MU)
|
Arguments
PD |
Plus-Downstream signal |
MD |
Minus-Downstream signal |
PU |
Plus-Upstream signal |
MU |
Plus-Upstream signal |
Value
Balance score of the same class as inputs.
Examples
1 2 3 4 5 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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