checkPooled: Helper for checking pooled signal
In CAGEfightR: Analysis of Cap Analysis of Gene Expression (CAGE) data using Bioconductor
Description
Usage
Arguments
Value
See Also
Examples
Description
Checks whether a supplied pooled signal is valid: Single bp disjoint with
signal in the score column with supplied genome information.
Usage
1
checkPooled(object)
Arguments
object
GRanges or GPos: Pooled signal to be checked
Value
TRUE if object is correct format, otherwise an error is thrown
See Also
Other Checking functions:
checkPeaked()
Examples
1
2
data(exampleCTSSs)
checkPooled(rowRanges(exampleCTSSs))
CAGEfightR documentation built on Nov. 8, 2020, 5:42 p.m.
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Description Usage Arguments Value See Also Examples
Description
Checks whether a supplied pooled signal is valid: Single bp disjoint with signal in the score column with supplied genome information.
Usage
1 | checkPooled(object)
|
Arguments
object |
GRanges or GPos: Pooled signal to be checked |
Value
TRUE if object is correct format, otherwise an error is thrown
See Also
Other Checking functions:
checkPeaked()
Examples
1 2 | data(exampleCTSSs)
checkPooled(rowRanges(exampleCTSSs))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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