API for CGHbase
CGHbase: Base functions and classes for arrayCGH data analysis.

Global functions
CGHbase Man page
CGHbase-package Man page
Wilting Man page
WiltingCalled Man page
WiltingNorm Man page
WiltingRaw Man page
WiltingRegions Man page
WiltingSeg Man page
avedist Man page
avedist,cghRegions-method Man page
bpend Man page
bpend,cghCall-method Man page
bpend,cghRaw-method Man page
bpend,cghRegions-method Man page
bpend,cghSeg-method Man page
bpstart Man page
bpstart,cghCall-method Man page
bpstart,cghRaw-method Man page
bpstart,cghRegions-method Man page
bpstart,cghSeg-method Man page
calls Man page
calls,cghCall-method Man page
calls<- Man page
calls<-,cghCall,matrix-method Man page
cghCall Man page
cghCall-class Man page
cghRaw Man page
cghRaw-class Man page
cghRegions Man page
cghRegions-class Man page
cghSeg Man page
cghSeg-class Man page
chromosomes Man page
chromosomes,cghCall-method Man page
chromosomes,cghRaw-method Man page
chromosomes,cghRegions-method Man page
chromosomes,cghSeg-method Man page
class:cghCall Man page
class:cghRaw Man page
class:cghRegions Man page
class:cghSeg Man page
convertChromosomeToArm Source code
copynumber Man page
copynumber,cghCall-method Man page
copynumber,cghRaw-method Man page
copynumber,cghSeg-method Man page
copynumber<- Man page
copynumber<-,cghCall,matrix-method Man page
copynumber<-,cghRaw,matrix-method Man page
copynumber<-,cghSeg,matrix-method Man page
featureDataRequiredColumns Source code
frequencyPlot Man page
frequencyPlot,cghRegions,missing-method Man page
frequencyPlotCalls Man page Source code
frequencyPlotCalls,cghCall,missing-method Man page
getCentromere Source code
getChromosomeLengths Source code
initialize,cghCall-method Man page
initialize,cghRaw-method Man page
initialize,cghRegions-method Man page
initialize,cghSeg-method Man page
makeEmptyFeatureData Source code
makeEmptyFeatureDataForRegions Source code
makeSegments Source code
make_cghRaw Man page Source code
nclone Man page
nclone,cghRegions-method Man page
plot,cghCall,missing-method Man page
plot,cghRaw,missing-method Man page
plot,cghSeg,missing-method Man page
plot.cghCall Man page
plot.cghRaw Man page
plot.cghRegions Man page
plot.cghRegions,cghRegions,missing-method Man page
plot.cghSeg Man page
plot.summary,cghCall,missing-method Man page
probamp Man page
probamp,cghCall-method Man page
probamp<- Man page
probamp<-,cghCall,matrix-method Man page
probdloss Man page
probdloss,cghCall-method Man page
probdloss<- Man page
probdloss<-,cghCall,matrix-method Man page
probgain Man page
probgain,cghCall-method Man page
probgain<- Man page
probgain<-,cghCall,matrix-method Man page
probloss Man page
probloss,cghCall-method Man page
probloss<- Man page
probloss<-,cghCall,matrix-method Man page
probnorm Man page
probnorm,cghCall-method Man page
probnorm<- Man page
probnorm<-,cghCall,matrix-method Man page
regions Man page
regions,cghRegions-method Man page
regions<- Man page
regions<-,cghRegions,matrix-method Man page
segmented Man page
segmented,cghCall-method Man page
segmented,cghSeg-method Man page
segmented<- Man page
segmented<-,cghCall,matrix-method Man page
segmented<-,cghSeg,matrix-method Man page
setFeatureData Source code
summaryPlot Man page Source code
CGHbase documentation built on May 2, 2018, 2:41 a.m.