copynumber: Retrieve copynumber data from cgh objects.

Description Usage Arguments Value Author(s) See Also Examples

Description

These generic functions access the copynumber values of assay data stored in an object derived from the cghRaw-class, cghSeg-class or cghCall-class.

Usage

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copynumber(object)
copynumber(object) <- value
segmented(object)
segmented(object) <- value
calls(object)
calls(object) <- value

Arguments

object

Object derived from class cghRaw, cghSeg, or cghCall

value

Matrix with rows representing features and columns samples.

Value

copynumber returns a matrix of copynumber values;

Author(s)

Sjoerd Vosse

See Also

cghRaw-class, cghSeg-class, cghCall-class

Examples

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CGHbase documentation built on May 31, 2017, 11:38 a.m.

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