chromosomes: Retrieve feature position data from cgh objects.

Description

These generic functions access the position data stored in the featureData of an object derived from the cghRaw-class, cghSeg-class or cghCall-class.

Usage

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chromosomes(object)
bpstart(object)
bpend(object)

Arguments

object

Object derived from class cghRaw, cghSeg, or cghCall

Value

chromosomes returns a vector of chromosome numbers; bpstart returns a vector of basepair start positions; bpend returns a vector of basepair end positions;

Author(s)

Sjoerd Vosse

See Also

cghRaw-class, cghSeg-class, cghCall-class


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