McmcParams: Create an object of class 'McmcParams' to specify iterations,...

In CNPBayes: Bayesian mixture models for copy number polymorphisms

Description

Create an object of class 'McmcParams' to specify iterations, burnin, etc.

Usage

McmcParams(iter = 1000L, burnin = 0L, thin = 1L, nStarts = 1L,
  param_updates = .param_updates(), min_GR = 1.2,
  min_effsize = round(1/3 * iter, 0), max_burnin = 32000,
  min_chains = 1)

Arguments

iter	number of iterations
burnin	number of burnin iterations
thin	thinning interval
nStarts	number of chains to run
param_updates	labeled vector specifying whether each parameter is to be updated (1) or not (0).

Value

An object of class 'McmcParams'

Examples

     mp <- McmcParams(iter=100, burnin=10)

CNPBayes documentation built on May 6, 2019, 4:06 a.m.