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The CNVRanger package implements a comprehensive tool suite for CNV analysis. This includes functionality for summarizing individual CNV calls across a population, assessing overlap with functional genomic regions, and association analysis with gene expression and quantitative phenotypes.
Package details |
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Author | Ludwig Geistlinger [aut, cre], Vinicius Henrique da Silva [aut], Marcel Ramos [ctb], Levi Waldron [ctb] |
Bioconductor views | CopyNumberVariation DifferentialExpression GeneExpression GenomeWideAssociation GenomicVariation Microarray RNASeq SNP |
Maintainer | Ludwig Geistlinger <ludwig_geistlinger@hms.harvard.edu> |
License | Artistic-2.0 |
Version | 1.6.1 |
Package repository | View on Bioconductor |
Installation |
Install the latest version of this package by entering the following in R:
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