universeBuilder: Return a vector of gene identifiers with category annotations

Description Usage Arguments Details Value Author(s) See Also

Description

Return all gene ids that are annotated at one or more terms in the category. If the universeGeneIds slot of p has length greater than zero, then the intersection of the gene ids specified in that slot and the normal return value is given.

Usage

1

Arguments

p

A subclass of HyperGParams-class

Details

End users should not call this directly. This method gets called from hyperGTest. To add support for a new category, a new method for this generic must be defined. Its signature should match a subclass of HyperGParams-class appropriate for the new category.

Value

A vector of gene identifiers.

Author(s)

S. Falcon

See Also

hyperGTest HyperGParams-class



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