Files in ChIC
Quality Control Pipeline for ChIP-Seq Data

.BBSoptions

NAMESPACE

DESCRIPTION

build/vignette.rds

R/ComparisonFunctions.R R/PrivateFunctions.R R/LM_functions.R R/GlobalFunctions.R vignettes/QC-metricsLM.pdf vignettes/QC-metricsLM1.pdf

vignettes/sectsty.sty

vignettes/ChIC-Vignette.Rnw

vignettes/phantomCrossCorrelation.pdf

vignettes/PTSerif.sty

vignettes/ScaledMetaGeneNormalized.pdf

vignettes/ChIC_Logo.png

vignettes/QC-metricsGM_EM.pdf man/chicWrapper.Rd man/qualityScores_LM.Rd man/getPeakCallingScores.Rd man/qualityScores_EM.Rd man/createMetageneProfile.Rd man/qualityScores_GM.Rd man/tagDensity.Rd man/predictionScore.Rd man/plotReferenceDistribution.Rd man/listAvailableElements.Rd man/qualityScores_LMgenebody.Rd man/listDatasets.Rd man/metagenePlotsForComparison.Rd man/getCrossCorrelationScores.Rd man/removeLocalTagAnomalies.Rd man/readBamFile.Rd

inst/doc/ChIC-Vignette.Rnw

inst/doc/ChIC-Vignette.pdf inst/doc/ChIC-Vignette.R

ChIC documentation built on Nov. 8, 2020, 5:15 p.m.

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