Files in ClassifyR

A framework for cross-validated classification problems, with applications to differential variability and differential distribution testing

R/naiveBayesKernel.R R/differentMeansSelection.R R/edgeRselection.R R/edgesToHubNetworks.R R/bartlettSelection.R R/samplesMetricMap.R R/selectionPlot.R R/rankingPlot.R R/forestFeatures.R R/calcPerformance.R R/classes.R R/utilities.R R/distribution.R R/NSCselectionInterface.R R/runTest.R R/leveneSelection.R R/DMDselection.R R/fisherDiscriminant.R R/kNNinterface.R R/plotFeatureClasses.R R/NSCpredictInterface.R R/classifyInterface.R R/mixmodels.R R/networkCorrelationsSelection.R R/elasticNetFeatures.R R/randomForestInterface.R R/KullbackLeiblerSelection.R R/limmaSelection.R R/ROCplot.R R/DLDAinterface.R R/getLocationsAndScales.R R/runTests.R R/subtractFromLocation.R R/easyHardClassifier.R R/SVMinterface.R R/performancePlot.R R/previousTrained.R R/easyHardFeatures.R R/KolmogorovSmirnovSelection.R R/NSCtrainInterface.R R/likelihoodRatioSelection.R R/kTSPclassifier.R R/featureSetSummary.R R/pairsDifferencesSelection.R R/previousSelection.R R/interactorDifferences.R R/elasticNetGLMinterface.R vignettes/ClassifyR.Rmd vignettes/wrapper.Rmd man/elasticNetFeatures.Rd man/ClassifyResult-class.Rd man/NSCpredictInterface.Rd man/bartlettSelection.Rd man/integerOrNumeric-class.Rd man/classifyInterface.Rd man/functionOrList-class.Rd man/svm-class.Rd man/previousTrained.Rd man/easyHardFeatures.Rd man/runTest.Rd man/mixmodels.Rd man/DMDselection.Rd man/SelectParams-class.Rd man/elasticNetGLMinterface.Rd man/listOrNULL-class.Rd man/selectionPlot.Rd man/FeatureSetCollectionOrNULL-class.Rd man/leveneSelection.Rd man/edgeRselection.Rd man/ResubstituteParams-class.Rd man/TrainParams-class.Rd man/differentMeansSelection.Rd man/featureSetSummary.Rd man/runTests.Rd man/interactorDifferences.Rd man/easyHardClassifier.Rd man/naiveBayesKernel.Rd man/rankingPlot.Rd man/functionOrNULL-class.Rd man/SVMinterface.Rd man/multnet-class.Rd man/FeatureSetCollection-class.Rd man/calcPerformance.Rd man/KullbackLeiblerSelection.Rd man/DLDAinterface.Rd man/samplesMetricMap.Rd man/likelihoodRatioSelection.Rd man/forestFeatures.Rd man/MixModelsListsSet-class.Rd man/pamrtrained-class.Rd man/characterOrDataFrame-class.Rd man/listOrCharacterOrNULL-class.Rd man/edgesToHubNetworks.Rd man/NSCtrainInterface.Rd man/TransformParams-class.Rd man/EasyHardClassifier-class.Rd man/limmaSelection.Rd man/fisherDiscriminant.Rd man/randomForest-class.Rd man/distribution.Rd man/PredictParams-class.Rd man/SelectResult-class.Rd man/NSCselectionInterface.Rd man/subtractFromLocation.Rd man/plotFeatureClasses.Rd man/ROCplot.Rd man/pairsDifferencesSelection.Rd man/kTSPclassifier.Rd man/performancePlot.Rd man/knnInterface.Rd man/randomForestInterface.Rd man/dlda-class.Rd man/previousSelection.Rd man/asthmaDataset.Rd man/KolmogorovSmirnovSelection.Rd man/getLocationsAndScales.Rd man/networkCorrelationsSelection.Rd inst/doc/ClassifyR.Rmd inst/doc/wrapper.Rmd inst/doc/wrapper.R inst/doc/ClassifyR.R