API for DBChIP
Differential Binding of Transcription Factor with ChIP-seq

Global functions
DBChIP Man page Source code
DBChIP-package Man page
MCS.list.merge Source code
MCS.merge Source code
NCIS Source code
NCIS.internal Source code
PHA4 Man page
bin.data Source code
binding.site.list Man page
chip.data.list Man page
combine.reps Source code
comp.background.size Source code
comp.bkg.size Source code
conds Man page
est.common.disp.by.collapse Source code
est.norm.med.search Source code
fdr Source code
get.NCIS.norm.factor Source code
get.binding.chr Source code
get.chr Source code
get.chr.len Source code
get.chr.site.count Source code
get.chr.unique.read.count Source code
get.cluster Source code
get.coverage Source code
get.site.count Man page Source code
get.site.count.hist Source code
get.unique.read.count Source code
get.unique.read.count.hist Source code
input.data.list Man page
load.data Man page Source code
median.ratio Source code
plotPeak Man page Source code
read.AlignedRead Source code
read.BED Source code
read.MCS Source code
read.MCS.list Source code
read.binding.site.list Man page Source code
read.data.list Source code
report.peak Man page Source code
single.peak Source code
site.merge Man page Source code
test.diff.binding Man page Source code
test.diff.binding.2sample Source code
test.diff.binding.DESeq Source code
test.diff.binding.edgeR Source code
unlist.data.frame Source code
DBChIP documentation built on May 31, 2017, 11:15 a.m.