createReport: Create report of RNAseq DEG anlaysis
In DEGreport: Report of DEG analysis
Description
Usage
Arguments
Value
Description
This function get the count matrix, pvalues, and FC of a
DEG analysis and create a report to help to detect possible problems
with the data.
Usage
1
createReport(g, counts, tags, pvalues, path, pop = 400, name = "DEGreport")
Arguments
g
Character vector with the group the samples belong to.
counts
Matrix with counts for each samples and each gene.
Should be same length than pvalues vector.
tags
Genes of DEG analysis
pvalues
pvalues of DEG analysis
path
path to save the figure
pop
random genes for background
name
name of the html file
Value
A HTML file with all figures and tables
DEGreport documentation built on Nov. 8, 2020, 7:23 p.m.
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Description Usage Arguments Value
Description
This function get the count matrix, pvalues, and FC of a DEG analysis and create a report to help to detect possible problems with the data.
Usage
1 | createReport(g, counts, tags, pvalues, path, pop = 400, name = "DEGreport")
|
Arguments
g |
Character vector with the group the samples belong to. |
counts |
Matrix with counts for each samples and each gene. Should be same length than pvalues vector. |
tags |
Genes of DEG analysis |
pvalues |
pvalues of DEG analysis |
path |
path to save the figure |
pop |
random genes for background |
name |
name of the html file |
Value
A HTML file with all figures and tables
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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