readBamAsBed: readBamAsBed
In DEScan2: Differential Enrichment Scan 2
Description
Usage
Arguments
Value
Examples
Description
read a bam file into a bed like format.
forcing UCSC format for chromosomes names.
Usage
1
Arguments
file
Character indicating path to bam file.
Value
GRanges object.
Examples
1
2
3
files <- list.files(system.file("extdata/bam", package="DEScan2"),
full.names=TRUE)
gr <- readBamAsBed(files[1])
DEScan2 documentation built on Nov. 8, 2020, 5:01 p.m.
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Description Usage Arguments Value Examples
Description
read a bam file into a bed like format. forcing UCSC format for chromosomes names.
Usage
1 |
Arguments
file |
Character indicating path to bam file. |
Value
GRanges object.
Examples
1 2 3 | files <- list.files(system.file("extdata/bam", package="DEScan2"),
full.names=TRUE)
gr <- readBamAsBed(files[1])
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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