evenRunSum: evenRunSum
In DEScan2: Differential Enrichment Scan 2
Description
Usage
Arguments
Value
View source: R/peakCallFunctions.R
Description
this function computes a running sum over x with a window
width k (modified from S4Vectors package to work on even k, in such a case
it adds a length at the end of the output Rle).
Usage
1
evenRunSum(x, k, endrule = c("drop", "constant"), na.rm = FALSE)
Arguments
x
an Rle object, typically a coverage object.
k
window dimension for the running sum over x.
endrule
refer to S4Vectors::runSum.
na.rm
refer to S4Vectors::runSum.
Value
an Rle within the running sum over x with a win of length k.
DEScan2 documentation built on Nov. 8, 2020, 5:01 p.m.
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Description Usage Arguments Value
View source: R/peakCallFunctions.R
Description
this function computes a running sum over x with a window width k (modified from S4Vectors package to work on even k, in such a case it adds a length at the end of the output Rle).
Usage
1 | evenRunSum(x, k, endrule = c("drop", "constant"), na.rm = FALSE)
|
Arguments
x |
an Rle object, typically a coverage object. |
k |
window dimension for the running sum over x. |
endrule |
refer to S4Vectors::runSum. |
na.rm |
refer to S4Vectors::runSum. |
Value
an Rle within the running sum over x with a win of length k.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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