showDiscreteValues: Prints the labels to which the algorithm converts the gene...
In DFP: Gene Selection

Description Usage Arguments Value Author(s) References

In an intermediate step, the algorithm discriminantFuzzyPattern converts the gene expression values into discrete labels (combining ‘Low’, ‘Medium’ and ‘High’, depending on the value of the param ‘overlapping’).
This function permits printing these labels, specifying a set of genes (a vector) and/or classes of samples.

1	showDiscreteValues(dvs, genes, classes)

`dvs`	A matrix with discrete labels for a set of genes (in rows) of several samples (in columns).
`genes`	[optional] The set of genes to plot.
`classes`	[optional] A set of classes to which the samples belong. It must be one of the classes stored in the phenoData of the original `ExpressionSet` object.

A subset of the matrix dvs determined by the restrictions (genes and/or classes).

Rodrigo Alvarez-Gonzalez
Daniel Glez-Pena
Fernando Diaz
Florentino Fdez-Riverola
Maintainer: Rodrigo Alvarez-Gonzalez <rodrigo.djv@uvigo.es>

F. Diaz; F. Fdez-Riverola; D. Glez-Pena; J.M. Corchado. Using Fuzzy Patterns for Gene Selection and Data Reduction on Microarray Data. 7th International Conference on Intelligent Data Engineering and Automated Learning: IDEAL 2006, (2006) pp. 1095-1102

DFP documentation built on Nov. 8, 2020, 7:46 p.m.