mergeOswAnalytes_ChromHeader: Merge dataframes from OSW and mzML files
In DIAlignR: Dynamic Programming Based Alignment of MS2 Chromatograms
Description
Usage
Arguments
Value
Author(s)
See Also
View source: R/merge_osw_mzml.R
Description
Merges dataframes on transition_id(OSW) = chromatogramId(mzML).
Usage
1
2
3
4
5
6
mergeOswAnalytes_ChromHeader(
oswAnalytes,
chromHead,
analyteFDR = 1,
runType = "DIA_proteomics"
)
Arguments
oswAnalytes
(dataframe) This is an output of getOswFiles.
chromHead
(dataframe) This has two columns: chromatogramId and chromatogramIndex with integer values.
analyteFDR
(numeric) Not used.
runType
(char) This must be one of the strings "DIA_proteomics", "DIA_Metabolomics".
Value
Invisible NULL
Author(s)
Shubham Gupta, shubh.gupta@mail.utoronto.ca
ORCID: 0000-0003-3500-8152
License: (c) Author (2019) + GPL-3
Date: 2019-12-13
See Also
DIAlignR documentation built on Nov. 8, 2020, 8:22 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Author(s) See Also
View source: R/merge_osw_mzml.R
Description
Merges dataframes on transition_id(OSW) = chromatogramId(mzML).
Usage
1 2 3 4 5 6 | mergeOswAnalytes_ChromHeader(
oswAnalytes,
chromHead,
analyteFDR = 1,
runType = "DIA_proteomics"
)
|
Arguments
oswAnalytes |
(dataframe) This is an output of getOswFiles. |
chromHead |
(dataframe) This has two columns: chromatogramId and chromatogramIndex with integer values. |
analyteFDR |
(numeric) Not used. |
runType |
(char) This must be one of the strings "DIA_proteomics", "DIA_Metabolomics". |
Value
Invisible NULL
Author(s)
Shubham Gupta, shubh.gupta@mail.utoronto.ca
ORCID: 0000-0003-3500-8152
License: (c) Author (2019) + GPL-3 Date: 2019-12-13
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.