get.max.geno: Get the genotype with the highest probability
In DOQTL: Genotyping and QTL Mapping in DO Mice

For each sample at each marker, return the genotype state with the highest probability.

1	get.max.geno(probs)

probs

Three dimensional numeric matrix containing the founder haplotype contributions.

If the maximum probability is greater than 0.75, it is called homozygous. Otherwise, we take the two highest probabilities and call heterozygous.

Character matrix containing the genotype with the highest probability at each locus.

Daniel Gatti

1	## Not run: get.max.geno(probs)

DOQTL documentation built on May 6, 2019, 3:09 a.m.

DOQTL index

Note that we can't provide technical support on individual packages. You should contact the package authors for that.

Description