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R/get.missense.snps.R
In DOQTL: Genotyping and QTL Mapping in DO Mice
################################################################################
# Given a VCF object from VariantAnnotation readVCF(), extract the SNPs that
# Daniel Gatti
# dan.gatti@jax.org
# May 19, 2016
################################################################################
get.missense.snps = function(vcf) {
csq = info(vcf)$CSQ
} # get.missense.snps()
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DOQTL documentation built on May 6, 2019, 3:09 a.m.
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################################################################################
# Given a VCF object from VariantAnnotation readVCF(), extract the SNPs that
# Daniel Gatti
# dan.gatti@jax.org
# May 19, 2016
################################################################################
get.missense.snps = function(vcf) {
csq = info(vcf)$CSQ
} # get.missense.snps()
Try the DOQTL package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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