Man pages for Dune
Improving replicability in single-cell RNA-Seq cell type discovery
| ARIEvolution | Plot the evolution of the pairwise ARIs as merging happens |
| ARIImp | ARI improvement |
| ARIs | ARI Matrix |
| ARItrend | ARI improvement plot |
| clusMat | A clustering matrix used to demonstrate the ari-merging... |
| clusterConversion | clusterConversion |
| ConfusionEvolution | Plot the evolution of the ConfusionPlot as merging happens |
| ConfusionPlot | Plot confusion matrix |
| dot-adjustedRandIndex | adjustedRandIndex |
| Dune | Dune |
| functionTracking | Track the evolution of a function along merging |
| intermediateMat | Find the clustering matrix that we would get if we stopped... |
| nuclei | Cluster labels for a subset of the allen Smart-Seq nuclei... |
| plotARIs | Plot an heatmap of the ARI matrix |
| plotPrePost | Plot the reduction in cluster size for an ARI merging with... |
| whenToStop | When to Stop |
