ConfusionEvolution: Plot the evolution of the ConfusionPlot as merging happens

In Dune: Improving replicability in single-cell RNA-Seq cell type discovery

Description

Animated version of ConfusionPlot

Usage

ConfusionEvolution(merger, unclustered = NULL, x, y, state_length = 1)

Arguments

merger	the result from having run Dune on the dataset
unclustered	The value assigned to unclustered cells. Default to NULL
x	The name of the first cluster label to plot
y	The name of the second cluster label to plot
state_length	Time between steps. Default to 1. See transition_states for details.

Details

See ConfusionPlot and animate.

Value

a gganim object

Examples

## Not run: 
  data("clusMat", package = "Dune")
  merger <- Dune(clusMat = clusMat)
  ConfusionEvolution(merger, x = "A", y = "B")
## End(Not run)

Dune documentation built on Nov. 8, 2020, 7:55 p.m.