extract the initial and final conditions from a table.
Extract the initial and final conditions from a table.
extract_working_sets(first_my_data, replicate_count1, replicate_count2)
A table to translate. The columns in the table should be as follows:
the number of columns (replicates) corresponding to initial conditions.
the number of columns (replicates) corresponding to final conditions.
a list containing the following:
probes — the set of probes.
initial — a data set of replicates corresponding to initial conditions.
final — a data set of replicates corresponding to final conditions.
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# read in the EcoliMutMA sample data from the package data(EcoliMutMA, package="ELBOW") csv_data <- EcoliMutMA # - OR - Read in a CSV file (uncomment - remove the #'s # - from the line below and replace 'filename' with # the CSV file's filename) # csv_data <- read.csv(filename) # set the number of initial and final condition replicates both to three init_count <- 3 final_count <- 3 # Parse the probes, intial conditions and final conditions # out of the CSV file. Please see: extract_working_sets # for more information. # # init_count should be the number of columns associated with # the initial conditions of the experiment. # final_count should be the number of columns associated with # the final conditions of the experiment. working_sets <- extract_working_sets(csv_data, init_count, final_count)
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