Description Usage Arguments Value Examples
A class for storing Illumina methylation array raw intensity data of two color channels, and probe annotation infomation.
1 2 |
Red |
A matrix of Red channel intensity values with row for methylation probes and column for samples |
Green |
A matrix of Green channel intensity values with row for methylation probes and column for samples |
NBeads |
A matrix contains the number of beads used to generate intensity values on the Red and Green channels. |
rowData |
A dataframe contains probe annotation information |
ictrl |
A dataframe contais detailed information for Illumina internal control probes |
... |
other arguments for class SummarizedExperiment |
An object of class rgDataSet
1 | showClass("rgDataSet")
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