Files in EventPointer
An effective identification of alternative splicing events using junction arrays and RNA-Seq data
EventPointer.Rproj
README.md
NEWS
NAMESPACE
DESCRIPTION
build/vignette.rds
data/MyPrimers.rda
data/ArrayDatamultipath.rda
data/ArraysData.rda
data/PSIss.rda
data/EventXtrans.rda
data/AllEvents_RNASeq_MP.rda
data/SG_RNASeq.rda
data/AllEvents_RNASeq.rda
data/MyPrimers_taqman.rda
R/MyPrimers.R
R/EventPointer_IGV.R
R/EventPointer_RNASeq_TranRef.R
R/EventsGTFfromTrancriptomeGTF.R
R/SG_RNASeq.R
R/ArrayDatamultipath.R
R/EventPointer_RNASeq.R
R/PSIss.R
R/GetPSI_FromTranRef.R
R/PSI_Statistic.R
R/CDFfromGTF_Multipath.R
R/ArraysData.R
R/EventXtrans.R
R/MyPrimers_taqman.R
R/EventPointer_RNASeq_IGV.R
R/FindPrimers.R
R/AllEvents_RNASeq_MP.R
R/AuxFunctions.R
R/getbootstrapkallisto.R
R/PrepareBam_EP.R
R/EventDetection.R
R/EventDetectionMultipath.R
R/CDFfromGTF.R
R/AllEvents_RNASeq.R
R/EventPointer.R
vignettes/Figure2.png
vignettes/Figure11.png
vignettes/EventPointer.Rmd
vignettes/Romero_Fig1.png
vignettes/Figure3.png
vignettes/Figure10.png
vignettes/Figure9.png
vignettes/Figure8.png
vignettes/Figure1.png
vignettes/Figure5.png
vignettes/Thumbs.db
vignettes/Esquema_bis.png
vignettes/Figure6.png
man/InternalFunctions.Rd
man/FindPrimers.Rd
man/EventPointer_IGV.Rd
man/EventPointer_RNASeq_IGV.Rd
man/EventDetection.Rd
man/ArraysData.Rd
man/getbootstrapkallisto.Rd
man/AllEvents_RNASeq_MP.Rd
man/EventXtrans.Rd
man/PSI_Statistic.Rd
man/PSIss.Rd
man/EventsGTFfromTrancriptomeGTF.Rd
man/EventDetectionMultipath.Rd
man/GetPSI_FromTranRef.Rd
man/SG_RNASeq.Rd
man/CDFfromGTF_Multipath.Rd
man/CDFfromGTF.Rd
man/EventPointer_RNASeq_TranRef.Rd
man/EventPointer_RNASeq.Rd
man/PrepareBam_EP.Rd
man/MyPrimers_taqman.Rd
man/EventPointer.Rd
man/ArrayDatamultipath.Rd
man/AllEvents_RNASeq.Rd
man/MyPrimers.Rd
tests/runTests.R
inst/CITATION
inst/doc/EventPointer.Rmd
inst/doc/EventPointer.html
inst/doc/EventPointer.R
inst/extdata/gencode.v24.ann_2genes.gtf
inst/extdata/Junction_Probes.txt
inst/extdata/DONSON.gtf
inst/extdata/PSR_Probes.txt
inst/extdata/EventsFound.txt
inst/extdata/EventsFound_RNASeq.txt
inst/extdata/FBXO31.gtf
inst/extdata/output/ERR315326/run_info.json
inst/extdata/output/ERR315326/abundance.h5
inst/extdata/output/ERR315326/abundance.tsv
inst/extdata/output/ERR315400/run_info.json
inst/extdata/output/ERR315400/abundance.h5
inst/extdata/output/ERR315400/abundance.tsv
inst/extdata/output/ERR315407/run_info.json
inst/extdata/output/ERR315407/abundance.h5
inst/extdata/output/ERR315407/abundance.tsv
inst/extdata/output/ERR315494/run_info.json
inst/extdata/output/ERR315494/abundance.h5
inst/extdata/output/ERR315494/abundance.tsv
inst/unitTests/test_EventPointer_RNASeq.R
inst/unitTests/test_EventDetection.R
inst/unitTests/test_EventPointer_RNASeq_IGV.R
inst/unitTests/test_EventPointer.R
inst/unitTests/test_EventPointer_RNASeq_TranRef.R
inst/unitTests/test_AuxFunctions.R
inst/unitTests/test_GetPSI_FromTranRef.R
inst/unitTests/test_PSI_Statistic.R
inst/unitTests/test_EventPointer_IGV.R
inst/unitTests/test_EventsGTFfromTrancriptomeGTF.R
inst/unitTests/test_EventDetectionMultipath.R
inst/unitTests/test_CDFfromGTF.R
inst/unitTests/test_getbootstrapkallisto.R
