ArrayDatamultipath: Preprocessed arrays data with multi-path events

In EventPointer: An effective identification of alternative splicing events using junction arrays and RNA-Seq data

Description

Preprocessed arrays data with multi-path events

Usage

data(ArrayDatamultipath)

Format

A data.frame with preprocessed arrays data. The preprocessing was done using aroma.affymetrix. See the package vignette for the preprocessing pipeline

Value

ArrayDatamultipath object contains preprocessed junction arrays data. The preprocessing was done using aroma.affymetrix R package, refer to EventPointer vignette for the pipeline used for the preprocessing. The data corresponds to 4 samples from the SUM149 Cell line hybridized to the HTA 2.0 Affymetrix array. The first two samples are control and the second ones are treated.

EventPointer documentation built on Nov. 8, 2020, 7:12 p.m.