Retrieve a copy of IMPC results associated with a flowRepData object
This method retrieves a copy of the results associated with
a parameter set of an IMPC experiment related to a
flowRepData object (i.e., to a FlowRepository
Object of class
Additional options, see the details section.
This method will return an object of class
list with a
copy of IMPC analysis results. This is what can typically be found in
but without the
You can specify the following additional options:
Index of the IMPC experiment that shall be used. Usually, there is no more than 1 IMPC experiment related to a
flowRepDataobject, but this argument is available for the odd case where there would be multiple IMPC experiments related to a single FlowRepository dataset.
Index of which IMPC parameter set of the IMPC experiment shall be used. When new IMPC results are submitted to FlowRepository, those will create a new paramater set associated with the particular IMPC experiment (i.e., previous results will not be overwritten). This argument can be used to specify which results are supposed to be coppied.
A list representing the results of IMPC gating. This list will usually
Those are IMPC codes defined at
1 2 3 4 5 6 7 8
## Get dataset from FlowRepository mySmallDataset <- flowRep.get("FR-FCM-ZZ3X", impc.details = TRUE) impcResultsCopy(mySmallDataset, experimentIndex = 1, resultIndex = 1) ## The result will be NULL since the "FR-FCM-ZZ3X" does not include ## any IMPC details. Right now, IMPC details are only in private instances ## of FlowRepository. This example will be updated to a better once once ## IMPC data is also included and public in the main public FlowRepository ## (flowrepository.org).