Description Usage Arguments Value Methods (by generic) Author(s)
This class mainly exists to overcome the lack of long integer use in R and the IRanges class in particular. The object is basically a restricted DataFrame object, with a few custom methods to mimic the behaviour of IRanges.
Coordinates is the constructor function for the Coordinatesclass.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28  Coordinates(start = NULL, end = NULL)
## S4 method for signature 'Coordinates'
length(x)
## S4 method for signature 'Coordinates'
nrow(x)
## S4 method for signature 'Coordinates'
ncol(x)
## S4 method for signature 'Coordinates'
start(x)
## S4 method for signature 'Coordinates'
end(x)
## S4 method for signature 'Coordinates'
width(x)
## S4 replacement method for signature 'Coordinates'
end(x) < value
## S4 replacement method for signature 'Coordinates'
start(x) < value
## S4 method for signature 'Coordinates'
width(x)

start 
The start vector, must be of same length as the end vector 
end 
The end vector, must be of same length as the start vector 
x 
The Coordinates object 
value 
A numeric vector. For replace method in 'start' and 'end'. 
An object of class Coordinates
length
: The length method
nrow
: The nrow method
ncol
: The ncol method
start
: The start accessor
end
: The end accessor
width
: The width accessor
end<
: Replacement method for end
start<
: Replacement method for end
width
: The width accessor
Georg Stricker [email protected]
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