Provides efficient containers for storing and manipulating short genomic alignments (typically obtained by aligning short reads to a reference genome). This includes read counting, computing the coverage, junction detection, and working with the nucleotide content of the alignments.
|Author||Hervé Pagès, Valerie Obenchain, Martin Morgan|
|Bioconductor views||Alignment Coverage DataImport Genetics Infrastructure RNASeq SNP Sequencing|
|Maintainer||Bioconductor Package Maintainer <email@example.com>|
|Package repository||View on Bioconductor|
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