Description Usage Arguments Details Value Examples
These functions send a query to the given database, and are the access point for all gtox functions that query or update the gtox database.
1 2 3 4 5 |
query |
Character of length 1, the query string |
db |
Character of length 1, the name of the gtox database |
drvr |
Character of length 1, which database driver to use |
Currently, the gtox package only supports the "MySQL" and "SQLite" database drivers.
gtoxQuery
returns a data.table object with the query results.
gtoxSendQuery
sends a query, but does not fetch any results, and
returns 'TRUE' or the error message given by the database.
None
1 2 3 4 5 6 7 8 9 10 11 12 13 14 | ## Perform query
gtoxSendQuery(paste0("SELECT * FROM assay_source"))
## Store the current config settings, so they can be reloaded at the end
## of the examples
conf_store <- gtoxConfList()
gtoxConfDefault()
gtoxQuery("SELECT 'Hello World';")
gtoxQuery("SELECT * FROM assay;")
## Reset configuration
options(conf_store)
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