API for GreyListChIP
Grey Lists -- Mask Artefact Regions Based on ChIP Inputs
| Global functions | |
|---|---|
| GreyList | Man page |
| GreyList-class | Man page |
| calcThreshold | Man page |
| calcThreshold,GreyList-method | Man page |
| calcThreshold.GreyList | Source code |
| ce10.blacklist | Man page |
| ce11.blacklist | Man page |
| countReads | Man page |
| countReads,GreyList-method | Man page |
| countReads.GreyList | Source code |
| dm3.blacklist | Man page |
| dm6.blacklist | Man page |
| estimateParams | Source code |
| export,GreyList,character,missing-method | Man page |
| export.GreyList | Source code |
| fitDist | Source code |
| getKaryotype | Man page |
| getKaryotype,GreyList-method | Man page |
| getKaryotype.GreyList | Source code |
| grch37.blacklist | Man page |
| grch38.blacklist | Man page |
| greyList | Man page |
| greyListBS | Man page Source code |
| hg19.blacklist | Man page |
| hg38.blacklist | Man page |
| initialize,GreyList,BSgenome-method | Man page |
| initialize.GreyList | Source code |
| loadKaryotype | Man page |
| loadKaryotype,GreyList-method | Man page |
| loadKaryotype.GreyList | Source code |
| makeGreyList | Man page |
| makeGreyList,GreyList-method | Man page |
| makeGreyList.GreyList | Source code |
| mm10.blacklist | Man page |
| mm9.blacklist | Man page |
| setKaryotype.GreyList | Source code |
| setRegions | Man page |
| setRegions,GreyList-method | Man page |
| setRegions.GreyList | Source code |
| show,GreyList-method | Man page |
| show.GreyList | Source code |
