hildaPlotSignature: Plot mutation signatures from HiLDA output

In HiLDA: Conducting statistical inference on comparing the mutational exposures of mutational signatures by using hierarchical latent Dirichlet allocation

Description

Plot mutation signatures from HiLDA output

Usage

hildaPlotSignature(hildaResult, sigOrder = NULL, colorList = NULL, ...)

Arguments

hildaResult	a rjags class output by HiLDA
sigOrder	the order of signatures if needed (default: NULL)
colorList	a vector of color for mutational exposures barplots
...	additional arguments passed on to visPMS

Value

a plot object containing all mutational signatures

Examples

inputFile <- system.file("extdata/hildaLocal.rdata", package="HiLDA")
hildaLocal <- readRDS(inputFile)
hildaPlotSignature(hildaLocal)

HiLDA documentation built on Nov. 8, 2020, 11:09 p.m.