ILoReg
ILoReg: a tool for high-resolution cell population identification from scRNA-Seq data

Package index
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Vignettes
Functions
89
Source code
4
Man pages
25
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ILoReg: ILoReg: a tool for high-resolution cell population identification from scRNA-Seq data
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API

API for ILoReg
ILoReg: a tool for high-resolution cell population identification from scRNA-Seq data

Global functions
AnnotationScatterPlot Man page
AnnotationScatterPlot,SingleCellExperiment-method Man page
AnnotationScatterPlot.SingleCellExperiment Man page Source code
CalcSilhInfo Man page
CalcSilhInfo,SingleCellExperiment-method Man page
CalcSilhInfo.SingleCellExperiment Man page Source code
ClusteringScatterPlot Man page
ClusteringScatterPlot,SingleCellExperiment-method Man page
ClusteringScatterPlot.SingleCellExperiment Man page Source code
DownOverSampling Man page Source code
FindAllGeneMarkers Man page
FindAllGeneMarkers,SingleCellExperiment-method Man page
FindAllGeneMarkers.SingleCellExperiment Man page Source code
FindGeneMarkers Man page
FindGeneMarkers,SingleCellExperiment-method Man page
FindGeneMarkers.SingleCellExperiment Man page Source code
GeneHeatmap Man page
GeneHeatmap,SingleCellExperiment-method Man page
GeneHeatmap.SingleCellExperiment Man page Source code
GeneScatterPlot Man page
GeneScatterPlot,SingleCellExperiment-method Man page
GeneScatterPlot.SingleCellExperiment Man page Source code
HierarchicalClustering Man page
HierarchicalClustering,SingleCellExperiment-method Man page
HierarchicalClustering.SingleCellExperiment Man page Source code
LogisticRegression Man page Source code
MergeClusters Man page
MergeClusters,SingleCellExperiment-method Man page
MergeClusters.SingleCellExperiment Man page Source code
PCAElbowPlot Man page
PCAElbowPlot,SingleCellExperiment-method Man page
PCAElbowPlot.SingleCellExperiment Man page Source code
PrepareILoReg Man page
PrepareILoReg,SingleCellExperiment-method Man page
PrepareILoReg.SingleCellExperiment Man page Source code
RenameAllClusters Man page
RenameAllClusters,SingleCellExperiment-method Man page
RenameAllClusters.SingleCellExperiment Man page Source code
RenameCluster Man page
RenameCluster,SingleCellExperiment-method Man page
RenameCluster.SingleCellExperiment Man page Source code
RunICP Man page Source code
RunPCA Man page
RunPCA,SingleCellExperiment-method Man page
RunPCA.SingleCellExperiment Man page Source code
RunParallelICP Man page
RunParallelICP,SingleCellExperiment-method Man page
RunParallelICP.SingleCellExperiment Man page Source code
RunTSNE Man page
RunTSNE,SingleCellExperiment-method Man page
RunTSNE.SingleCellExperiment Man page Source code
RunUMAP Man page
RunUMAP,SingleCellExperiment-method Man page
RunUMAP.SingleCellExperiment Man page Source code
SelectKClusters Man page
SelectKClusters,SingleCellExperiment-method Man page
SelectKClusters.SingleCellExperiment Man page Source code
SelectTopGenes Man page Source code
SilhouetteCurve Man page
SilhouetteCurve,SingleCellExperiment-method Man page
SilhouetteCurve.SingleCellExperiment Man page Source code
VlnPlot Man page
VlnPlot,SingleCellExperiment-method Man page
VlnPlot.SingleCellExperiment Man page Source code
pbmc3k_500 Man page
ILoReg documentation built on Nov. 8, 2020, 8:20 p.m.

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