PrepareILoReg: Prepare 'SingleCellExperiment' object for 'ILoReg' analysis
In ILoReg: ILoReg: a tool for high-resolution cell population identification from scRNA-Seq data
Description
Usage
Arguments
Value
Examples
Description
This function prepares the SingleCellExperiment object for
ILoReg analysis. The only required input is an object of class
SingleCellExperiment with at least data in the logcounts slot.
Usage
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PrepareILoReg.SingleCellExperiment(object)
## S4 method for signature 'SingleCellExperiment'
PrepareILoReg(object)
Arguments
object
an object of SingleCellExperiment class
Value
an object of SingleCellExperiment class
Examples
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library(SingleCellExperiment)
sce <- SingleCellExperiment(assays = list(logcounts = pbmc3k_500))
sce <- PrepareILoReg(sce)
ILoReg documentation built on Nov. 8, 2020, 8:20 p.m.
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Description Usage Arguments Value Examples
Description
This function prepares the SingleCellExperiment object for
ILoReg analysis. The only required input is an object of class
SingleCellExperiment with at least data in the logcounts slot.
Usage
1 2 3 4 | PrepareILoReg.SingleCellExperiment(object)
## S4 method for signature 'SingleCellExperiment'
PrepareILoReg(object)
|
Arguments
object |
an object of |
Value
an object of SingleCellExperiment class
Examples
1 2 3 | library(SingleCellExperiment)
sce <- SingleCellExperiment(assays = list(logcounts = pbmc3k_500))
sce <- PrepareILoReg(sce)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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