IONiseR provides tools for the quality assessment of Oxford Nanopore MinION data. It extracts summary statistics from a set of fast5 files and can be used either before or after base calling. In addition to standard summaries of the read-types produced, it provides a number of plots for visualising metrics relative to experiment run time or spatially over the surface of a flowcell.
|Author||Mike Smith [aut, cre]|
|Bioconductor views||DataImport QualityControl Sequencing|
|Maintainer||Mike Smith <[email protected]>|
|License||MIT + file LICENSE|
|Package repository||View on Bioconductor|
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