fastqTemplate: Extract template reads
In IONiseR: Quality Assessment Tools for Oxford Nanopore MinION data
Description
Usage
Arguments
Value
Examples
Description
This generic function accesses the fastq slot stored in an object derived
from the Fast5Summary class, and returns only the template reads.
Usage
1
Arguments
x
Object of class Fast5Summary
Value
A ShortReadQ object
Examples
1
2
3
4
if( require(minionSummaryData) ) {
data(s.typhi.rep2, package = 'minionSummaryData')
fastqTemplate( s.typhi.rep2 )
}
IONiseR documentation built on Nov. 8, 2020, 6 p.m.
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Description Usage Arguments Value Examples
Description
This generic function accesses the fastq slot stored in an object derived from the Fast5Summary class, and returns only the template reads.
Usage
1 |
Arguments
x |
Object of class |
Value
A ShortReadQ object
Examples
1 2 3 4 | if( require(minionSummaryData) ) {
data(s.typhi.rep2, package = 'minionSummaryData')
fastqTemplate( s.typhi.rep2 )
}
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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