GLAD.GLAD: GLAD analysis

In ITALICS: ITALICS

Description

Glad Analysis ot the genomic profile

Usage

analyseCGH(data, amplicon, deletion, deltaN, forceGL, param, nbsigma, ...)

Arguments

data	A data frame containing SNP's intensity, chromosome and position on the genome. data must have a Chr, X and LogRatio columns
amplicon	see the amplicon parameter in the daglad function
deletion	see the deletion parameter in the daglad function
deltaN	see the deltaN parameter in the daglad function
forceGL	see the forceGL parameter in the daglad function
param	see the param parameter in the daglad function
nbsigma	see the nbsigma parameter in the daglad function
...	Other daglad parameters.

Value

An object of class profileCGH

Note

People interested in tools dealing with array CGH analysis and DNA copy number analysis can

visit our web-page http://bioinfo.curie.fr.

Author(s)

Guillem Rigaill, [e-mail].

Source

Institut Curie, [e-mail].

ITALICS documentation built on Nov. 8, 2020, 6:48 p.m.