GLAD.GLAD: GLAD analysis

Description Usage Arguments Value Note Author(s) Source

Description

Glad Analysis ot the genomic profile

Usage

1
analyseCGH(data, amplicon, deletion, deltaN, forceGL, param, nbsigma, ...)

Arguments

data

A data frame containing SNP's intensity, chromosome and position on the genome. data must have a Chr, X and LogRatio columns

amplicon

see the amplicon parameter in the daglad function

deletion

see the deletion parameter in the daglad function

deltaN

see the deltaN parameter in the daglad function

forceGL

see the forceGL parameter in the daglad function

param

see the param parameter in the daglad function

nbsigma

see the nbsigma parameter in the daglad function

...

Other daglad parameters.

Value

An object of class profileCGH

Note

People interested in tools dealing with array CGH analysis and DNA copy number analysis can

visit our web-page http://bioinfo.curie.fr.

Author(s)

Guillem Rigaill, italics@curie.fr.

Source

Institut Curie, italics@curie.fr.


ITALICS documentation built on Nov. 8, 2020, 6:48 p.m.