InteractionSet: Base Classes for Storing Genomic Interaction Data

Provides the GInteractions, InteractionSet and ContactMatrix objects and associated methods for storing and manipulating genomic interaction data from Hi-C and ChIA-PET experiments.

Getting started

Package details

AuthorAaron Lun [aut, cre], Malcolm Perry [aut], Elizabeth Ing-Simmons [aut]
Bioconductor views DataRepresentation HiC Infrastructure Software
MaintainerAaron Lun <[email protected]>
LicenseGPL-3
Version1.10.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("InteractionSet")

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InteractionSet documentation built on Nov. 1, 2018, 2:03 a.m.