InteractionSet: Base Classes for Storing Genomic Interaction Data

Provides the GInteractions, InteractionSet and ContactMatrix objects and associated methods for storing and manipulating genomic interaction data from Hi-C and ChIA-PET experiments.

Package details

AuthorAaron Lun [aut, cre], Malcolm Perry [aut], Elizabeth Ing-Simmons [aut]
Bioconductor views DataRepresentation HiC Infrastructure Software
MaintainerAaron Lun <>
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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InteractionSet documentation built on April 17, 2021, 6 p.m.