Description Usage Arguments Value Author(s) Examples
names() function for LineagePulseObject. Allow usage of LineagePulse ouput object like a list with respect to the most relevant output: dfLineagePulseResults and vecDEGenes. List of all available list-object like accessors: names,LineagePulseObject-method, [[,LineagePulseObject,character,missing-method, $,LineagePulseObject-method.
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x |
(LineagePulseObject) LineagePulse output object. |
i |
(str) Element from x list to be retrieved. |
j |
() Ignored argument to generic. |
... |
() Ignored argument to generic. |
Target element from x.
David Sebastian Fischer
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lsSimulatedData <- simulateContinuousDataSet(
scaNCells = 10,
scaNConst = 2,
scaNLin = 2,
scaNImp = 2,
scaMumax = 100,
scaSDMuAmplitude = 3,
vecNormConstExternal=NULL,
vecDispExternal=rep(20, 6),
vecGeneWiseDropoutRates = rep(0.1, 6))
objLP <- runLineagePulse(
counts = lsSimulatedData$counts,
dfAnnotation = lsSimulatedData$annot,
strMuModel = "impulse")
head(objLP[["dfResults"]])
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