LiquidAssociation: LiquidAssociation

The package contains functions for calculate direct and model-based estimators for liquid association. It also provides functions for testing the existence of liquid association given a gene triplet data.

Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("LiquidAssociation")
AuthorYen-Yi Ho <yho@jhsph.edu>
Bioconductor views CellBiology GeneExpression Genetics Network Pathways TimeCourse
Date of publicationNone
MaintainerYen-Yi Ho <yho@jhsph.edu>
LicenseGPL (>=3)
Version1.30.0

View on Bioconductor

Functions

boots.gla.se2 Man page
boots.se Man page
CNM-class Man page
CNM.full Man page
CNM.full,eSet-method Man page
CNM.full,matrix-method Man page
CNM.full-methods Man page
CNM.simple Man page
CNM.simple,eSet-method Man page
CNM.simple,matrix-method Man page
CNM.simple-methods Man page
est.table Man page
est.table1 Man page
form Man page
getsGLA Man page
getsGLA,eSet-method Man page
getsGLA,matrix-method Man page
getsGLA-methods Man page
getsLA Man page
getsLA,eSet-method Man page
getsLA,matrix-method Man page
getsLA-methods Man page
GLA Man page
GLA,eSet-method Man page
GLA,matrix-method Man page
GLA-methods Man page
LA Man page
LA,eSet-method Man page
LA,matrix-method Man page
LA-methods Man page
LiquidAssociation Man page
LiquidAssociation-package Man page
permute3.se Man page
plotGLA Man page
plotGLA,eSet-method Man page
plotGLA,matrix-method Man page
plotGLA-methods Man page
print,CNM-method Man page
product Man page
qqnorm2 Man page
show,CNM-method Man page
stand Man page

Files

DESCRIPTION
NAMESPACE
R
R/SetInternal2.R R/SetMethod2.R
build
build/vignette.rds
inst
inst/doc
inst/doc/LiquidAssociation.R
inst/doc/LiquidAssociation.Rnw
inst/doc/LiquidAssociation.pdf
man
man/CNM-class.Rd man/CNM.full-methods.Rd man/CNM.simple-methods.Rd man/GLA-methods.Rd man/LA-methods.Rd man/LiquidAssociation-Internal.Rd man/LiquidAssociation-package.Rd man/getsGLA-methods.Rd man/getsLA-methods.Rd man/plotGLA-methods.Rd
vignettes
vignettes/LiquidAssociation.Rnw
vignettes/NGBayes3.bib
vignettes/biom.bst
vignettes/biom.sty
vignettes/natbib.sty

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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