LiquidAssociation: LiquidAssociation

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The package contains functions for calculate direct and model-based estimators for liquid association. It also provides functions for testing the existence of liquid association given a gene triplet data.

Author
Yen-Yi Ho <yho@jhsph.edu>
Date of publication
None
Maintainer
Yen-Yi Ho <yho@jhsph.edu>
License
GPL (>=3)
Version
1.28.0

View on Bioconductor

Man pages

CNM-class
Class CNM
CNM.full-methods
The function fits a full conditional normal model (CNM)
CNM.simple-methods
The function fits a reduced conditional normal model (CNM)
getsGLA-methods
Function to calculate the sGLA test statistic for a given...
getsLA-methods
Function to calculate the sLA test statistic for a given...
GLA-methods
Function to calculate GLA estimate
LA-methods
Function to calculate LA estimate
LiquidAssociation-Internal
Internal LiquidAssociation Functions
LiquidAssociation-package
Liquid Associaiton Package
plotGLA-methods
The function plots scatter plots of two variables...

Files in this package

LiquidAssociation/DESCRIPTION
LiquidAssociation/NAMESPACE
LiquidAssociation/R
LiquidAssociation/R/SetInternal2.R
LiquidAssociation/R/SetMethod2.R
LiquidAssociation/build
LiquidAssociation/build/vignette.rds
LiquidAssociation/inst
LiquidAssociation/inst/doc
LiquidAssociation/inst/doc/LiquidAssociation.R
LiquidAssociation/inst/doc/LiquidAssociation.Rnw
LiquidAssociation/inst/doc/LiquidAssociation.pdf
LiquidAssociation/man
LiquidAssociation/man/CNM-class.Rd
LiquidAssociation/man/CNM.full-methods.Rd
LiquidAssociation/man/CNM.simple-methods.Rd
LiquidAssociation/man/GLA-methods.Rd
LiquidAssociation/man/LA-methods.Rd
LiquidAssociation/man/LiquidAssociation-Internal.Rd
LiquidAssociation/man/LiquidAssociation-package.Rd
LiquidAssociation/man/getsGLA-methods.Rd
LiquidAssociation/man/getsLA-methods.Rd
LiquidAssociation/man/plotGLA-methods.Rd
LiquidAssociation/vignettes
LiquidAssociation/vignettes/LiquidAssociation.Rnw
LiquidAssociation/vignettes/NGBayes3.bib
LiquidAssociation/vignettes/biom.bst
LiquidAssociation/vignettes/biom.sty
LiquidAssociation/vignettes/natbib.sty