API for M3Drop
Michaelis-Menten Modelling of Dropouts in single-cell RNASeq

Global functions
BrenneckeGetVariableGenes Man page Source code
ConvertSetstoTable Source code
M3DropCleanData Man page Source code
M3DropDifferentialExpression Man page Source code
M3DropDropoutModels Man page Source code
M3DropExpressionHeatmap Man page Source code
M3DropGetExtremes Man page Source code
M3DropGetHeatmapCellClusters Man page Source code
M3DropGetMarkers Man page Source code
M3DropTestShift Man page Source code
M3DropThreeSetVenn Man page Source code
PlaceLabels Source code
bg__add_model_to_plot Source code
bg__calc_variables Source code
bg__dropout_plot_base Source code
bg__expression_heatmap Source code
bg__filter_cells Source code
bg__fit_MM Man page Source code
bg__fit_ZIFA Man page Source code
bg__fit_logistic Man page Source code
bg__get_extreme_residuals Source code
bg__highlight_genes Source code
bg__horizontal_residuals_MM_log10 Source code
bg__test_DE_K_equiv Source code
circle_intersection Source code
circle_line_intersection Source code
hidden__UQ Source code
hidden__fit_MM_logistic Source code
hidden__fit_MM_lognormal Source code
hidden__invert_MM Source code
hidden__normalize Source code
hidden__test_DE_K_equiv_raw Source code
hidden__test_DE_P_equiv Source code
hidden__test_DE_S_equiv Source code
hidden_getAUC Source code
plot.venn.diagram Source code
venn.overlap Source code
M3Drop documentation built on May 2, 2018, 2:40 a.m.