Files in MIGSA
Massive and Integrative Gene Set Analysis
NEWS
NAMESPACE
DESCRIPTION
build/vignette.rds
data/migsaRes.RData
data/datalist
data/bcMigsaRes.RData
R/MIGSAres-genesManipulation.R
R/GSEAres.R
R/GoAnalysis.R
R/data-migsaRes.R
R/FitOptions-class.R
R/data-bcMigsaRes.R
R/MIGSAres.R
R/MIGSAres-GoAnalysis.R
R/DEnricher.R
R/MIGSAres-common.R
R/GenesetsRes.R
R/Genesets-asGenesets.R
R/IGSAinput-getterSetters.R
R/SEAparams-class.R
R/IGSAinput.R
R/FitOptions.R
R/Genesets-loadGo.R
R/MIGSAmGSZ.R
R/ExprData-class.R
R/MIGSAres-plotting.R
R/GSEAparams.R
R/IGSAinput-getDEGenes.R
R/MIGSA.R
R/GenesetRes.R
R/Genesets.R
R/GSEAparams-class.R
R/IGSAres.R
R/MIGSAres-getAdditionalInfo.R
R/MIGSAPackage.R
R/Genesets-enrichr.R
R/SEAres.R
R/Genesets-geneSetsFromFile.R
R/IGSAinput-class.R
R/SEAparams.R
R/IGSA.R
R/MGSZ.R
R/summaryFunctions.R
R/MIGSAres-class.R
R/MIGSAmultiplot.R
R/MIGSAres-setEnrCutoff.R
vignettes/MIGSA.Rnw
vignettes/gettingPbcmcData.Rnw
vignettes/MIGSA.bib
vignettes/gettingTcgaData.Rnw
vignettes/ClassDiagrams/SEAparams.eps
vignettes/ClassDiagrams/MIGSApublicSimple.eps
vignettes/ClassDiagrams/geneSetsFunc.eps
vignettes/ClassDiagrams/MIGSAres.eps
vignettes/ClassDiagrams/MIGSAfunc.eps
vignettes/ClassDiagrams/GSEAparams.eps
vignettes/ClassDiagrams/FitOptions.eps
vignettes/ClassDiagrams/IGSAinput.eps
man/MIGSAres-class.Rd
man/IGSAinput-class.Rd
man/summaryFunctions.Rd
man/MIGSAres-getAdditionalInfo.Rd
man/IGSAinput-getterSetters.Rd
man/MIGSA.Rd
man/bcMigsaRes.Rd
man/MIGSAmGSZ.Rd
man/Genesets-as.Genesets.Rd
man/Genesets-geneSetsFromFile.Rd
man/IGSAinput-getDEGenes.Rd
man/Genesets-enrichr.Rd
man/MIGSAres-common.Rd
man/MIGSAres-plots.Rd
man/FitOptions-class.Rd
man/Genesets-loadGo.Rd
man/ExprData-class.Rd
man/MIGSAres-genesManipulation.Rd
man/MIGSAPackage.Rd
man/SEAparams-class.Rd
man/GSEAparams-class.Rd
man/MIGSAres-GoAnalysis.Rd
man/migsaRes.Rd
man/MIGSAres-setEnrCutoff.Rd
tests/runTests.R
inst/CITATION
inst/doc/gettingTcgaData.R
inst/doc/MIGSA.Rnw
inst/doc/gettingPbcmcData.Rnw
inst/doc/gettingTcgaData.pdf
inst/doc/gettingPbcmcData.R
inst/doc/MIGSA.R
inst/doc/gettingPbcmcData.pdf
inst/doc/MIGSA.pdf
inst/doc/gettingTcgaData.Rnw
inst/unitTests/test_MIGSA.R
