MTHGVS: convert mitochondrial variant calls to HGVS format for naming

Description Usage Arguments Value Examples

View source: R/MTHGVS.R

Description

convert mitochondrial variant calls to HGVS format for naming

Usage

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MTHGVS(x, asMVR = FALSE, verbose = FALSE)

Arguments

x

an MVRanges (or, in a pinch, a GRanges)

asMVR

return a renamed MVRanges? (default is FALSE)

verbose

be yappy? (default is FALSE)

Value

proper HGVS names for the *Ranges (or a renamed *Ranges)

Examples

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library(MTseekerData) 
data(RONKSvariants) 
MTHGVS(RONKSvariants$RO_1)

MTseeker documentation built on Oct. 31, 2019, 3:20 a.m.